AutoSort#
Multimodal deep learning for real-time stable decoding of month-long neural activities from the same cells#
AutoSort is designed to tackle two significant challenges in long-term stable recording. - First, it efficiently aligns neurons over the course of long-term recordings to ensure consistent tracking of the same neurons each day. - Second, it accurately sorts spikes while maintaining the precision throughout the recordings, ensuring that the performance achieved at the first of the recordings is sustained throughout the later days.
Contents#
- Overview
- Installation
- Tutorials
- API Reference
- Submodules
- autosort_neuron.auto_sorting module
- autosort_neuron.config module
- autosort_neuron.detection module
- autosort_neuron.model module
- autosort_neuron.run module
- autosort_neuron.sma module
- autosort_neuron.sorting module
- autosort_neuron.utils module
- autosort_neuron.waveform_loader module
- Module contents
- About
Quick start#
Spike sorting#
autosort_neuron.run provides tools to efficiently sort spikes from long-term recordings.
Online decoding#
autosort_neuron.decoding provides tools to decode neural activities from the same cells across days.
Step-by-step guide#
Check out our detailed tutorials on how to use AutoSort with provided real electrophysiology datasets.